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Intron Name: Anas_platyrhynchos_platyrhynchos_3_113792596_113793699_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

113792596 - 113793699

Intron Length:

1104

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TAC|GCAGGGTGG

5'SS Class:

weak_major

3'SS Sequence:

TAGGCATTCTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAC

U12 Branch Point Sequence:

TTTTCCTGTAGG

Flanking Amino Acid:

YGHPSPISQVLSAMSGHGSS

Intron Amino Acid Position:

177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.1

0.21

1.9

52.5

44.7

Major BPS

71.4

0.53

1.1

63.4

Major PPT

66.8

0.38

62.4

Minor 5ss

25.8

-2.8

4.3

35.6

42.1

Minor BPS

52.3

-0

2.2

68.48

44.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011103

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011560

113792423 - 113796716

4294