Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_113794198_113795098_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

113794198 - 113795098

Intron Length:

901

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAAGCCT

5'SS Class:

major

3'SS Sequence:

TTTGGGTCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TGTGCTTTTATA

Flanking Amino Acid:

ACGLYMKLHGVPRPLAMRKE

Intron Amino Acid Position:

102

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.9

0.47

1.1

60.3

44.2

Major BPS

79.2

0.73

75.3

39.4

Major PPT

72.1

0.5

64.8

41.4

Minor 5ss

32.3

-2

3.4

40.1

45.5

Minor BPS

56.1

0.18

1.7

67.32

39.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011103

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011560

113792423 - 113796716

4294