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Intron Name: Anas_platyrhynchos_platyrhynchos_3_113874184_113874430_R


Intron Information:

Intron Rank:
12

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
113874184 - 113874430

Intron Length:
247

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACGGTGC

5'SS Class:
major

3'SS Sequence:
CGTTCCCCTCTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGCTGAA

U12 Branch Point Sequence:
TGCTGAATAACC

Flanking Amino Acid:
IITYGRIPYPGMTNPEVIRN

Intron Amino Acid Position:
454

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79
0.68
1
65
42.1

Major BPS
67
0.42
1.1
57.3
41.7

Major PPT
72.1
0.5
0.8
62.9
34.5

Minor 5ss
36
-1.6
3.5
50.3
46.3

Minor BPS
45.9
-0.3
2.2
61.36
43.4

Associated Gene:

Gene:
BLK

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

113873403 - 113894617
21215

113873403 - 113903866
30464