Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_113879808_113880285_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

113879808 - 113880285

Intron Length:

478

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAAGAGC

5'SS Class:

major

3'SS Sequence:

TCCTTTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGGAA

U12 Branch Point Sequence:

TTATTTGGAAGC

Flanking Amino Acid:

IYIVTEYMANGCLLDYLKTE

Intron Amino Acid Position:

334

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

62.9

41.6

Major BPS

62.2

0.3

1.4

63.4

44.3

Major PPT

88.1

0.86

0.6

24.1

Minor 5ss

32.1

-2

3.2

39.8

41.1

Minor BPS

43.8

-0.4

2.2

59.01

40.4

Associated Gene:

Gene:

BLK

Ensembl Gene ID:

ENSAPLG00000014958

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046849

113873403 - 113894617

21215

ENSAPLT00000015648

113873403 - 113903866

30464