Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_113961090_113961696_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

113961090 - 113961696

Intron Length:

607

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGAACT

5'SS Class:

strong_major

3'SS Sequence:

CCTCCCTCCCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTAAAA

U12 Branch Point Sequence:

TGTTGTGTAAAA

Flanking Amino Acid:

SKVHAELMGEYYHYRYGLDF

Intron Amino Acid Position:

208

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

80.9

Major BPS

0.2

1.2

65.3

38.6

Major PPT

69.5

0.44

0.7

61.5

Minor 5ss

37.8

-1.4

51.4

38.8

Minor BPS

46.3

-0.2

2.4

64.9

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014703

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031594

113957054 - 113967745

10692

ENSAPLT00000023064

113957054 - 113967745

10692

ENSAPLT00000015329

113959347 - 113967745

8399