Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_113987694_113988388_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

113987694 - 113988388

Intron Length:

695

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGCAG

5'SS Class:

strong_major

3'SS Sequence:

TCTTGGCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACAAAA

U12 Branch Point Sequence:

GCCTCCTGACTT

Flanking Amino Acid:

VAPQSLQLWEGVFLRWNRPS

Intron Amino Acid Position:

497

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

69.6

42.7

Major BPS

51.5

0.04

0.9

57.3

24.9

Major PPT

80.8

0.69

0.9

76.9

37.3

Minor 5ss

30.1

-2.3

3.2

37.6

47.1

Minor BPS

50.4

0.09

1.8

65.07

45.7

Associated Gene:

Gene:

MTMR9

Ensembl Gene ID:

ENSAPLG00000014233

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039223

113983542 - 114005674

22133

ENSAPLT00000035736

113985716 - 114005674

19959

ENSAPLT00000014841

113985235 - 114005674

20440