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Intron Name: Anas_platyrhynchos_platyrhynchos_3_114027245_114027833_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

114027245 - 114027833

Intron Length:

589

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGAGAG

5'SS Class:

strong_major

3'SS Sequence:

TCCTCCCTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAC

U12 Branch Point Sequence:

GCTGTTATAACC

Flanking Amino Acid:

VLLLFSMAVPGYGQKKGFCA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

40.1

Major BPS

77.9

0.69

78.3

31.3

Major PPT

0.63

0.7

72.5

25.6

Minor 5ss

29.3

-2.4

3.3

Minor BPS

49.3

-0

1.7

58.92

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028757

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038523

114025961 - 114028344

2384