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Intron Name: Anas_platyrhynchos_platyrhynchos_3_11416502_11420318_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11416502 - 11420318

Intron Length:

3817

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GGG|GCGAGCTGT

5'SS Class:

major

3'SS Sequence:

CAGGCACTGGGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTCCCAC

U12 Branch Point Sequence:

AGTCCCACCAGT

Flanking Amino Acid:

SWAGSEGCKALA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.2

0.45

1.2

59.2

45.4

Major BPS

47.8

-0.1

1.4

58.1

40.4

Major PPT

-0.4

1.7

39.5

Minor 5ss

29.4

-2.4

38.1

46.8

Minor BPS

39.3

-0.7

2.3

58.25

Associated Gene:

Gene:

COMMD1

Ensembl Gene ID:

ENSAPLG00000006974

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022982

11393016 - 11420325

27310

ENSAPLT00000033853

11343450 - 11420325

76876