Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_114186074_114205802_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

114186074 - 114205802

Intron Length:

19729

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TGTCTTCCGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTAAC

U12 Branch Point Sequence:

TCCTGTCTAACT

Flanking Amino Acid:

IQKNRAETLPCVSSVASLMS

Intron Amino Acid Position:

312

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

37.8

Major BPS

66.8

0.42

1.2

69.6

35.5

Major PPT

73.4

0.53

69.9

36.6

Minor 5ss

35.5

-1.7

3.3

48.1

41.3

Minor BPS

50.1

0.08

2.1

71.75

45.6

Associated Gene:

Gene:

XKR6

Ensembl Gene ID:

ENSAPLG00000011357

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047981

114082877 - 114208314

125438

ENSAPLT00000029432

114082877 - 114240512

157636

ENSAPLT00000011811

114082877 - 114207103

124227