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Intron Name: Anas_platyrhynchos_platyrhynchos_3_11418646_11419972_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11418646 - 11419972

Intron Length:

1327

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAACTCAT

5'SS Class:

major

3'SS Sequence:

CTTTTTCCCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACTCAC

U12 Branch Point Sequence:

TTTTTCCCAAAG

Flanking Amino Acid:

YVDSIYLQTLWCITAFTTVT

Intron Amino Acid Position:

305

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

1.2

70.6

41.3

Major BPS

59.5

0.24

1.2

63.3

35.6

Major PPT

73.5

0.53

74.9

27.8

Minor 5ss

41.6

-0.9

55.6

Minor BPS

49.5

-0.1

65.66

41.7

Associated Gene:

Gene:

CRLS1

Ensembl Gene ID:

ENSAPLG00000007013

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007275

11418558 - 11423448

4891