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Intron Name: Anas_platyrhynchos_platyrhynchos_3_114268578_114270892_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

114268578 - 114270892

Intron Length:

2315

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGGA

5'SS Class:

strong_major

3'SS Sequence:

TTACTCCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

CTCCCCTTACTC

Flanking Amino Acid:

KRVHYMKFAKGKDLSSRSED

Intron Amino Acid Position:

132

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.8

75.2

35.1

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

82.3

0.73

0.8

73.8

36.6

Minor 5ss

29.8

-2.3

3.3

38.8

46.3

Minor BPS

56.6

0.19

1.7

63.11

Associated Gene:

Gene:

PINX1

Ensembl Gene ID:

ENSAPLG00000011359

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011822

114259645 - 114312629

52985

ENSAPLT00000035589

114257620 - 114313424

55805