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Intron Name: Anas_platyrhynchos_platyrhynchos_3_114270970_114312023_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

114270970 - 114312023

Intron Length:

41054

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATGAG

5'SS Class:

strong_major

3'SS Sequence:

TGTTCCCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAC

U12 Branch Point Sequence:

TTTTTTCTGACT

Flanking Amino Acid:

GKRQKTTKTQEDATDPESQE

Intron Amino Acid Position:

158

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

74.7

35.6

Major BPS

81.4

0.78

0.9

71.3

36.7

Major PPT

80.8

0.69

0.8

74.3

30.8

Minor 5ss

31.4

-2.1

3.2

39.6

46.4

Minor BPS

66.3

0.59

1.6

87.21

31.8

Associated Gene:

Gene:

PINX1

Ensembl Gene ID:

ENSAPLG00000011359

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035589

114257620 - 114313424

55805

ENSAPLT00000011822

114259645 - 114312629

52985