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Intron Name: Anas_platyrhynchos_platyrhynchos_3_114323392_114368911_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

114323392 - 114368911

Intron Length:

45520

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAAGGAT

5'SS Class:

strong_major

3'SS Sequence:

GCTTCTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTAAT

U12 Branch Point Sequence:

CAAACCCTAATC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

75.4

34.2

Major BPS

69.6

0.49

1.1

69.5

Major PPT

82.9

0.74

0.8

76.8

31.8

Minor 5ss

30.2

-2.3

3.7

45.9

49.3

Minor BPS

50.6

-0

1.7

58.22

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017902

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023735

114322351 - 114404401

82051