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Intron Name: Anas_platyrhynchos_platyrhynchos_3_11438854_11440140_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11438854 - 11440140

Intron Length:

1287

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGCATC

5'SS Class:

strong_major

3'SS Sequence:

ACGTGTGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACACAT

U12 Branch Point Sequence:

GAGCGCTTACCA

Flanking Amino Acid:

LTTTVDWQSVKVQELMSDDQ

Intron Amino Acid Position:

287

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

35.3

Major BPS

61.1

0.28

29.8

Major PPT

68.9

0.43

61.4

Minor 5ss

45.7

-0.5

2.8

61.4

37.1

Minor BPS

46.5

-0.2

54.74

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007052

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007341

11425760 - 11444172

18413