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Intron Name: Anas_platyrhynchos_platyrhynchos_3_114395502_114401735_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

114395502 - 114401735

Intron Length:

6234

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCAGATC

5'SS Class:

major

3'SS Sequence:

TTTTTTTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAA

U12 Branch Point Sequence:

TCTCTTTCAAGC

Flanking Amino Acid:

LGDEKQADAEGHAELLCC*

Intron Amino Acid Position:

2388

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.8

0.44

66.5

Major BPS

78.4

0.71

0.9

81.3

29.8

Major PPT

90.7

0.92

0.6

84.9

29.9

Minor 5ss

29.7

-2.3

3.5

42.1

44.9

Minor BPS

-0.1

1.8

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017902

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037575

114375201 - 114404401

29201

ENSAPLT00000023735

114322351 - 114404401

82051