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Intron Name: Anas_platyrhynchos_platyrhynchos_3_11442149_11442886_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11442149 - 11442886

Intron Length:

738

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATGTG

5'SS Class:

strong_major

3'SS Sequence:

CTCTTCTGTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATGAA

U12 Branch Point Sequence:

TTGTAAGGAATA

Flanking Amino Acid:

LQCMGLAIHQVLTKDLERHA

Intron Amino Acid Position:

158

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.9

78.6

35.9

Major BPS

66.7

0.41

57.8

Major PPT

75.3

0.57

0.9

37.1

Minor 5ss

35.7

-1.6

3.4

48.7

47.5

Minor BPS

41.6

-0.6

2.3

58.4

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007052

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007341

11425760 - 11444172

18413