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Intron Name: Anas_platyrhynchos_platyrhynchos_3_114438798_114439376_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

114438798 - 114439376

Intron Length:

579

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGGGGG

5'SS Class:

major

3'SS Sequence:

TTCTATCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATATAT

U12 Branch Point Sequence:

TATCTTCTATCT

Flanking Amino Acid:

YYGWIMTETALDQTKTIFKN

Intron Amino Acid Position:

345

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.8

0.37

1.2

44.9

Major BPS

62.6

0.31

59.1

37.6

Major PPT

86.1

0.81

0.8

80.8

30.8

Minor 5ss

31.5

-2.1

3.6

47.3

48.1

Minor BPS

48.4

-0

1.9

70.93

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013066

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013600

114438645 - 114455373

16729