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Intron Name: Anas_platyrhynchos_platyrhynchos_3_11450060_11451202_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11450060 - 11451202

Intron Length:

1143

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTCAT

5'SS Class:

strong_major

3'SS Sequence:

TTGGCTTTCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

ATGTTTTTGATC

Flanking Amino Acid:

VLGAVMERMGGYGSIIQMYP

Intron Amino Acid Position:

212

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.8

0.98

0.7

83.1

30.9

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

73.5

0.53

0.9

68.6

37.3

Minor 5ss

30.4

-2.2

2.9

40.4

45.7

Minor BPS

62.5

0.38

1.1

66.29

33.8

Associated Gene:

Gene:

TRMT6

Ensembl Gene ID:

ENSAPLG00000007761

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008062

11445132 - 11455792

10661