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Intron Name: Anas_platyrhynchos_platyrhynchos_3_11451867_11454539_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11451867 - 11454539

Intron Length:

2673

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

ATTTCTTTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACTAAT

U12 Branch Point Sequence:

ATTTCTTTTACA

Flanking Amino Acid:

AALLREKNADGLIVASKFHP

Intron Amino Acid Position:

362

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.9

85.2

32.2

Major BPS

0.47

1.2

69.9

35.3

Major PPT

89.6

0.89

0.7

84.2

Minor 5ss

38.2

-1.3

3.4

49.9

46.4

Minor BPS

0.72

1.5

81.53

33.1

Associated Gene:

Gene:

TRMT6

Ensembl Gene ID:

ENSAPLG00000007761

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008062

11445132 - 11455792

10661