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Intron Name: Anas_platyrhynchos_platyrhynchos_3_11454813_11455618_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11454813 - 11455618

Intron Length:

806

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGATT

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTCGTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TCTGTCGTAAAG

Flanking Amino Acid:

LSETWLRNYQVLPDRSHPKL

Intron Amino Acid Position:

426

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.7

1.03

0.8

91.6

26.4

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

66.1

0.36

1.1

66.8

38.6

Minor 5ss

38.2

-1.3

3.4

56.9

47.4

Minor BPS

46.4

-0.4

2.2

55.39

46.1

Associated Gene:

Gene:

TRMT6

Ensembl Gene ID:

ENSAPLG00000007761

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008062

11445132 - 11455792

10661