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Intron Name: Anas_platyrhynchos_platyrhynchos_3_114814605_114823573_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
114814605 - 114823573

Intron Length:
8969

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTGAGAGCC

5'SS Class:
strong_major

3'SS Sequence:
CATTTCTTTCTAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTCTCAT

U12 Branch Point Sequence:
ACTTTCTCATTT

Flanking Amino Acid:
AVRVRPMNRRELDLHTKCVV

Intron Amino Acid Position:
19

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
85.8
0.84
0.8
72.1
31.2

Major BPS
94.9
1.12
0.6
93.9
14.7

Major PPT
81.2
0.7
0.8
73.6
36.6

Minor 5ss
26.3
-2.7
3.1
33.4
42

Minor BPS
51.6
0.13
1.8
69.81
41.8

Associated Gene:

Gene:
KIF13B

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

114814550 - 114931343
116794

114814550 - 114931343
116794