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Intron Name: Anas_platyrhynchos_platyrhynchos_3_114823668_114860186_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
114823668 - 114860186

Intron Length:
36519

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAAGATGT

5'SS Class:
strong_major

3'SS Sequence:
CTTCTGGGAGCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ACCACAT

U12 Branch Point Sequence:
TGTACCACATCC

Flanking Amino Acid:
VNTNLSKGDASRTQPKVFAY

Intron Amino Acid Position:
50

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
91.6
0.98
0.8
81.6
33.2

Major BPS
56.3
0.16
1
62.9
34.3

Major PPT
62.3
0.28
1.1
58
42

Minor 5ss
39.7
-1.2
3.1
56.6
47.5

Minor BPS
45.7
-0.3
2.1
61.83
42.7

Associated Gene:

Gene:
KIF13B

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

114814550 - 114931343
116794

114814550 - 114931343
116794