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Intron Name: Anas_platyrhynchos_platyrhynchos_3_114865270_114866697_F


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
114865270 - 114866697

Intron Length:
1428

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAAGGATC

5'SS Class:
strong_major

3'SS Sequence:
AAATTGTATCTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGCTTAT

U12 Branch Point Sequence:
TGGCTGTGAAAA

Flanking Amino Acid:
LSKLAVASYKDIESLMSEGN

Intron Amino Acid Position:
197

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
92.2
1
0.8
86
30.3

Major BPS
76.2
0.65
1.1
65.7
43.2

Major PPT
61.2
0.25
1.1
52.2
46.3

Minor 5ss
36.8
-1.5
3.3
51.2
45.7

Minor BPS
42.1
-0.6
2.1
51.52
39.6

Associated Gene:

Gene:
KIF13B

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

114814550 - 114931343
116794

114814550 - 114931343
116794