Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_114873687_114876586_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

114873687 - 114876586

Intron Length:

2900

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGAATT

5'SS Class:

strong_major

3'SS Sequence:

TTACTTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCTTTAC

U12 Branch Point Sequence:

TTTGCTTTACTT

Flanking Amino Acid:

KLREQLTKAEAMKSPELKER

Intron Amino Acid Position:

388

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.8

86.3

Major BPS

56.2

0.16

1.3

51.3

43.9

Major PPT

85.6

0.8

81.1

30.6

Minor 5ss

45.5

-0.5

2.9

66.2

44.9

Minor BPS

65.3

0.56

1.7

82.98

39.3

Associated Gene:

Gene:

KIF13B

Ensembl Gene ID:

ENSAPLG00000005429

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038680

114814550 - 114931343

116794

ENSAPLT00000005668

114814550 - 114931343

116794