Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_114879556_114881486_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

114879556 - 114881486

Intron Length:

1931

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAATA

5'SS Class:

strong_major

3'SS Sequence:

TTAATTTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TCTGAATTAATT

Flanking Amino Acid:

LNELLVYYLKEHTLIGSDNS

Intron Amino Acid Position:

470

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

83.2

28.3

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

81.1

0.7

0.9

76.1

37.6

Minor 5ss

36.4

-1.5

3.1

48.8

46.9

Minor BPS

53.9

0.2

1.9

73.83

43.2

Associated Gene:

Gene:

KIF13B

Ensembl Gene ID:

ENSAPLG00000005429

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038680

114814550 - 114931343

116794

ENSAPLT00000005668

114814550 - 114931343

116794