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Intron Name: Anas_platyrhynchos_platyrhynchos_3_114888223_114888870_F


Intron Information:

Intron Rank:
20

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
114888223 - 114888870

Intron Length:
648

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTTTGTTAT

5'SS Class:
major

3'SS Sequence:
CCTTTTTCATCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
AAATAAT

U12 Branch Point Sequence:
TCCTTTTTCATC

Flanking Amino Acid:
AVPIINQKGEVSGRLHVEVV

Intron Amino Acid Position:
830

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.6
0.65
1.1
77.8
32.5

Major BPS
71.2
0.53
1
70.3
31.9

Major PPT
81.3
0.7
0.8
81.5
29

Minor 5ss
44.3
-0.6
2.5
58.6
46

Minor BPS
51.2
0.02
1.7
60.33
40.5

Associated Gene:

Gene:
KIF13B

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

114814550 - 114931343
116794

114814550 - 114931343
116794