Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_115064966_115067395_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

115064966 - 115067395

Intron Length:

2430

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTGTAC

5'SS Class:

major

3'SS Sequence:

GTTTCTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

GTATTTTTGAGT

Flanking Amino Acid:

LKDGSTFLDKELKECSGHVF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.3

0.48

1.1

38.1

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

86.7

0.83

0.8

81.1

30.9

Minor 5ss

-1.6

3.4

49.9

46.7

Minor BPS

56.2

0.28

1.6

71.54

39.8

Associated Gene:

Gene:

INTS9

Ensembl Gene ID:

ENSAPLG00000006167

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006427

115060197 - 115122055

61859