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Intron Name: Anas_platyrhynchos_platyrhynchos_3_115083778_115089396_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

115083778 - 115089396

Intron Length:

5619

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAGGTCGT

5'SS Class:

major

3'SS Sequence:

CTCTCTCTCTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTGAT

U12 Branch Point Sequence:

ACCTCGTTAATT

Flanking Amino Acid:

GMVGEFCSNLAMTVRNGGNV

Intron Amino Acid Position:

288

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.59

1.1

63.6

48.1

Major BPS

79.8

0.74

0.9

69.4

37.7

Major PPT

77.7

0.62

0.7

76.7

25.4

Minor 5ss

34.1

-1.8

3.2

45.3

Minor BPS

59.1

0.36

2.1

73.58

Associated Gene:

Gene:

INTS9

Ensembl Gene ID:

ENSAPLG00000006167

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006427

115060197 - 115122055

61859