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Intron Name: Anas_platyrhynchos_platyrhynchos_3_115296088_115301078_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

115296088 - 115301078

Intron Length:

4991

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCAAGTTCC

5'SS Class:

strong_major

3'SS Sequence:

TTATGTTTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TCATTTTTATTT

Flanking Amino Acid:

PLNHQLMNDKVFEERRALLG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.1

1.14

0.7

85.2

29.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

81.5

0.71

0.8

76.7

37.3

Minor 5ss

31.1

-2.2

3.8

44.6

43.4

Minor BPS

58.4

0.34

1.5

71.47

40.5

Associated Gene:

Gene:

FBXO16

Ensembl Gene ID:

ENSAPLG00000014547

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039008

115295397 - 115328724

33328

ENSAPLT00000031559

115294669 - 115328724

34056

ENSAPLT00000015179

115294669 - 115325850

31182