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Intron Name: Anas_platyrhynchos_platyrhynchos_3_115335678_115336769_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

115335678 - 115336769

Intron Length:

1092

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTCAC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCATGAA

U12 Branch Point Sequence:

GGGTCATGAATT

Flanking Amino Acid:

HEQGKDVNLNKLKTKTSAKY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

75.1

35.1

Major BPS

62.9

0.32

1.1

53.9

41.5

Major PPT

87.4

0.84

0.7

84.9

Minor 5ss

36.2

-1.6

2.9

44.9

36.9

Minor BPS

52.3

0.15

1.8

68.08

42.3

Associated Gene:

Gene:

ELP3

Ensembl Gene ID:

ENSAPLG00000014280

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028214

115334990 - 115412684

77695

ENSAPLT00000017944

115334990 - 115399319

64330

ENSAPLT00000040255

115334990 - 115404506

69517

ENSAPLT00000014919

115335578 - 115401394

65817

ENSAPLT00000039482

115334990 - 115407621

72632

ENSAPLT00000034136

115334990 - 115415415

80426