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Intron Name: Anas_platyrhynchos_platyrhynchos_3_115361947_115365047_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

115361947 - 115365047

Intron Length:

3101

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGAGA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTTCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTAAAT

U12 Branch Point Sequence:

GGGCTCTAAATC

Flanking Amino Acid:

VYEDVARDTNRGHTVKAVCE

Intron Amino Acid Position:

246

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.7

0.84

0.9

74.8

Major BPS

69.8

0.49

1.1

75.5

35.2

Major PPT

87.4

0.84

0.7

80.6

31.4

Minor 5ss

26.2

-2.7

2.9

30.9

42.7

Minor BPS

48.2

-0.1

1.6

52.68

Associated Gene:

Gene:

ELP3

Ensembl Gene ID:

ENSAPLG00000014280

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028214

115334990 - 115412684

77695

ENSAPLT00000017944

115334990 - 115399319

64330

ENSAPLT00000040255

115334990 - 115404506

69517

ENSAPLT00000014919

115335578 - 115401394

65817

ENSAPLT00000039482

115334990 - 115407621

72632

ENSAPLT00000034136

115334990 - 115415415

80426