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Intron Name: Anas_platyrhynchos_platyrhynchos_3_115390131_115395342_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

115390131 - 115395342

Intron Length:

5212

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGATTT

5'SS Class:

strong_major

3'SS Sequence:

CTCTTCTAACCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTCTAA

U12 Branch Point Sequence:

TCTCTTCTAACC

Flanking Amino Acid:

EIHHKVRPYQIELVRRDYVA

Intron Amino Acid Position:

406

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

81.6

33.2

Major BPS

52.3

0.06

1.3

54.1

41.5

Major PPT

72.3

0.5

66.6

38.5

Minor 5ss

42.5

-0.8

3.4

64.3

47.2

Minor BPS

56.3

0.18

1.7

67.77

37.9

Associated Gene:

Gene:

ELP3

Ensembl Gene ID:

ENSAPLG00000014280

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040255

115334990 - 115404506

69517

ENSAPLT00000017944

115334990 - 115399319

64330

ENSAPLT00000039482

115334990 - 115407621

72632

ENSAPLT00000014919

115335578 - 115401394

65817

ENSAPLT00000034136

115334990 - 115415415

80426

ENSAPLT00000028214

115334990 - 115412684

77695