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Intron Name: Anas_platyrhynchos_platyrhynchos_3_115422997_115424693_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

3UTR

Intron Coordinates:

115422997 - 115424693

Intron Length:

1697

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTGGTGTC

5'SS Class:

major

3'SS Sequence:

TTTTCTTTCGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGTTAT

U12 Branch Point Sequence:

TATTTTGCAGCT

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

1.2

72.1

39.4

Major BPS

63.6

0.34

1.4

57.4

49.1

Major PPT

87.2

0.84

0.6

84.7

22.9

Minor 5ss

32.2

-2

3.4

43.7

44.1

Minor BPS

44.4

-0.3

2.3

68.67

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014279

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014871

115422408 - 115428303

5896