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Intron Name: Anas_platyrhynchos_platyrhynchos_3_115428304_115428596_R

Intron Information:

Intron Rank:

Intron Class:

minor-like

Intron Phase:

5UTR

Intron Coordinates:

115428304 - 115428596

Intron Length:

293

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCTCCTCC

5'SS Class:

weak_minor

3'SS Sequence:

TTAATTTTTCTAG|G

3'SS Class:

strong_BPS

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.4

0.06

1.4

50.3

41.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

80.7

0.69

0.9

73.8

41.4

Minor 5ss

57.6

0.26

2.1

69.5

Minor BPS

84.9

1.17

0.8

94.97

24.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014279

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018468

115425316 - 115429234

3919