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Intron Name: Anas_platyrhynchos_platyrhynchos_3_115440245_115443192_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

115440245 - 115443192

Intron Length:

2948

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAGAT

5'SS Class:

strong_major

3'SS Sequence:

CTTACCCCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATCAT

U12 Branch Point Sequence:

TGTTCCTTACCC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

75.1

35.1

Major BPS

71.6

0.54

33.1

Major PPT

0.54

0.8

70.7

30.3

Minor 5ss

30.7

-2.2

3.7

46.1

49.1

Minor BPS

76.2

0.8

1.6

83.37

36.3

Associated Gene:

Gene:

PNOC

Ensembl Gene ID:

ENSAPLG00000029372

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028071

115439389 - 115448808

9420