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Intron Name: Anas_platyrhynchos_platyrhynchos_3_115446680_115447785_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

115446680 - 115447785

Intron Length:

1106

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTGAGTACG

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCTT

U12 Branch Point Sequence:

TTTTTTTTCTCT

Flanking Amino Acid:

KQYLGMSPRSTFRHRLPAPA

Intron Amino Acid Position:

179

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.52

65.5

40.2

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

94.8

1.01

0.5

92.6

17.3

Minor 5ss

32.8

-2

2.7

40.5

Minor BPS

45.5

-0.2

3.6

82.72

39.3

Associated Gene:

Gene:

PNOC

Ensembl Gene ID:

ENSAPLG00000029372

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028071

115439389 - 115448808

9420