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Intron Name: Anas_platyrhynchos_platyrhynchos_3_115454767_115455447_R


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
115454767 - 115455447

Intron Length:
681

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GGG|GTAAGGCCC

5'SS Class:
major

3'SS Sequence:
TTCTCCCTGGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTCAC

U12 Branch Point Sequence:
TGCATTTTCACC

Flanking Amino Acid:
IKRHVRTQHLGDSADSEQRK

Intron Amino Acid Position:
345

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.9
0.66
1.1
62.8
40.3

Major BPS
90.1
0.99
0.7
91.6
20.3

Major PPT
76.5
0.6
0.9
73.2
31.7

Minor 5ss
31.6
-2.1
3.2
35.1
41

Minor BPS
48.9
-0.1
1.8
58.71
40.7

Associated Gene:

Gene:
ZNF395

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

115450095 - 115466106
16012

115452160 - 115466106
13947