Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_115455549_115455639_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

115455549 - 115455639

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCAAAA

5'SS Class:

major

3'SS Sequence:

ATTTGTCCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAC

U12 Branch Point Sequence:

CGAGCTCTATTT

Flanking Amino Acid:

LDEPAPRKRKNSVKVMYKCL

Intron Amino Acid Position:

312

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.6

0.46

1.2

38.9

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

75.7

0.58

0.9

66.7

Minor 5ss

37.3

-1.4

3.1

48.9

46.9

Minor BPS

42.3

-0.5

1.9

53.57

42.3

Associated Gene:

Gene:

ZNF395

Ensembl Gene ID:

ENSAPLG00000021341

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046412

115450095 - 115466106

16012

ENSAPLT00000021622

115452160 - 115466106

13947