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Intron Name: Anas_platyrhynchos_platyrhynchos_3_11558796_11564394_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11558796 - 11564394

Intron Length:

5599

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACCAAG

5'SS Class:

major

3'SS Sequence:

CTCTTTTTATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTCT

U12 Branch Point Sequence:

TCTCTTTTTATT

Flanking Amino Acid:

TFEVRGPSAPGEVFAICGSC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

1.2

68.8

43.8

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

79.9

0.67

0.8

81.3

29.1

Minor 5ss

44.3

-0.6

2.7

56.9

47.4

Minor BPS

55.4

0.25

1.6

72.15

39.3

Associated Gene:

Gene:

GPCPD1

Ensembl Gene ID:

ENSAPLG00000008381

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022439

11558710 - 11594197

35488

ENSAPLT00000008749

11552521 - 11593367

40847

ENSAPLT00000045315

11553279 - 11594197

40919