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Intron Name: Anas_platyrhynchos_platyrhynchos_3_115626134_115626921_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

115626134 - 115626921

Intron Length:

788

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGCAC

5'SS Class:

major

3'SS Sequence:

TCTGCTTTGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAT

U12 Branch Point Sequence:

CGTTCCTCATCC

Flanking Amino Acid:

QPKSFKEEGEDFQSCLICIA

Intron Amino Acid Position:

236

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

63.9

42.4

Major BPS

82.3

0.8

0.9

81.8

30.8

Major PPT

75.6

0.58

72.4

37.7

Minor 5ss

29.7

-2.3

3.5

40.5

Minor BPS

56.1

0.17

1.9

67.5

43.8

Associated Gene:

Gene:

NCOA1

Ensembl Gene ID:

ENSAPLG00000013551

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014179

115596604 - 115652068

55465