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Intron Name: Anas_platyrhynchos_platyrhynchos_3_115627018_115627545_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

115627018 - 115627545

Intron Length:

528

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGCCC

5'SS Class:

major

3'SS Sequence:

CCCCCCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GAGTAAC

U12 Branch Point Sequence:

TTTTCTCTCTCT

Flanking Amino Acid:

ESFVTKQDTTGKIISIDTSS

Intron Amino Acid Position:

268

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

63.3

41.2

Major BPS

49.6

-0

1.3

53.3

40.4

Major PPT

66.9

0.38

0.7

57.1

27.1

Minor 5ss

32.1

-2

3.2

43.2

43.9

Minor BPS

41.4

-0.5

3.7

80.25

Associated Gene:

Gene:

NCOA1

Ensembl Gene ID:

ENSAPLG00000013551

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014179

115596604 - 115652068

55465