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Intron Name: Anas_platyrhynchos_platyrhynchos_3_115629645_115629747_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

115629645 - 115629747

Intron Length:

103

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TAG|GCACCGGGT

5'SS Class:

major

3'SS Sequence:

GCATGGCAAACAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATGGCAA

U12 Branch Point Sequence:

CCACCATGCACT

Flanking Amino Acid:

GITPPQFMSPSGCGGAGGGG

Intron Amino Acid Position:

487

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.5

0.56

1.2

67.4

Major BPS

46.8

-0.2

1.4

55.1

42.1

Major PPT

0.02

1.1

43.5

41.3

Minor 5ss

25.1

-2.9

4.5

46.9

48.5

Minor BPS

42.3

-0.5

2.1

56.41

45.2

Associated Gene:

Gene:

NCOA1

Ensembl Gene ID:

ENSAPLG00000013551

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014179

115596604 - 115652068

55465