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Intron Name: Anas_platyrhynchos_platyrhynchos_3_115634280_115635137_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

115634280 - 115635137

Intron Length:

858

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACC|GTAGGTGTC

5'SS Class:

major

3'SS Sequence:

CTGCTTCCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TGTTCGTTGATT

Flanking Amino Acid:

AAARAPAGLNPLSSGQGVQP

Intron Amino Acid Position:

844

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.26

1.4

43.3

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

73.8

0.54

0.8

65.5

36.1

Minor 5ss

37.7

-1.4

3.6

56.1

42.1

Minor BPS

63.9

0.52

2.1

83.73

37.5

Associated Gene:

Gene:

NCOA1

Ensembl Gene ID:

ENSAPLG00000013551

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014179

115596604 - 115652068

55465