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Intron Name: Anas_platyrhynchos_platyrhynchos_3_115642862_115643546_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

115642862 - 115643546

Intron Length:

685

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

ACG|GCACGGTGA

5'SS Class:

major

3'SS Sequence:

CCCCCCCTTACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTAAT

U12 Branch Point Sequence:

CCCCCCTTACAG

Flanking Amino Acid:

QQMTPQVRGTRPPLNAQMLA

Intron Amino Acid Position:

1149

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.6

0.46

1.3

43.9

Major BPS

61.6

0.29

1.3

63.6

42.5

Major PPT

75.1

0.56

0.8

67.5

Minor 5ss

25.2

-2.9

4.2

37.3

47.4

Minor BPS

46.4

-0.4

1.8

45.4

46.8

Associated Gene:

Gene:

NCOA1

Ensembl Gene ID:

ENSAPLG00000013551

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014179

115596604 - 115652068

55465