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Intron Name: Anas_platyrhynchos_platyrhynchos_3_11564480_11565701_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11564480 - 11565701

Intron Length:

1222

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTTCCACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTGAA

U12 Branch Point Sequence:

AATTCTTGAAAT

Flanking Amino Acid:

QAAVVLQTDDCELWKATVEL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

89.6

24.1

Major BPS

74.6

0.61

65.6

41.4

Major PPT

0.76

0.7

79.5

26.1

Minor 5ss

46.3

-0.4

2.8

64.1

41.5

Minor BPS

0.52

1.5

78.25

37.2

Associated Gene:

Gene:

GPCPD1

Ensembl Gene ID:

ENSAPLG00000008381

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045315

11553279 - 11594197

40919

ENSAPLT00000022439

11558710 - 11594197

35488

ENSAPLT00000008749

11552521 - 11593367

40847