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Intron Name: Anas_platyrhynchos_platyrhynchos_3_115654885_115655752_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

115654885 - 115655752

Intron Length:

868

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGCGCGGG

5'SS Class:

major

3'SS Sequence:

TTCTCTTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

ATTTCACTACAT

Flanking Amino Acid:

GGAMRTVVLEAPDEAALTVL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.1

54.2

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

83.5

0.75

0.7

76.7

Minor 5ss

29.2

-2.4

3.4

37.8

Minor BPS

46.9

-0.1

2.2

74.08

41.9

Associated Gene:

Gene:

PTRHD1

Ensembl Gene ID:

ENSAPLG00000017657

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036167

115654168 - 115655960

1793