Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_115662380_115662618_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

115662380 - 115662618

Intron Length:

239

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGTGG

5'SS Class:

strong_major

3'SS Sequence:

GTGGTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGGCAG

U12 Branch Point Sequence:

GTCCCCCCAGCC

Flanking Amino Acid:

ESTGVMGNIQVVEETHLILK

Intron Amino Acid Position:

1077

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

66.5

41.6

Major BPS

38.5

-0.7

1.7

42.8

49.4

Major PPT

66.1

0.36

0.9

58.7

38.3

Minor 5ss

30.7

-2.2

3.2

37.8

47.1

Minor BPS

43.1

-0.5

54.2

Associated Gene:

Gene:

ADCY3

Ensembl Gene ID:

ENSAPLG00000013028

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044877

115661276 - 115673152

11877