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Intron Name: Anas_platyrhynchos_platyrhynchos_3_115662744_115662829_R


Intron Information:

Intron Rank:
18

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
115662744 - 115662829

Intron Length:
86

Sequence Information:

Terminal Dinucleotides:
GC-AG

5'SS Sequence:
TAG|GCAAGTCCG

5'SS Class:
strong_major

3'SS Sequence:
TCTCCTCACGTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCCTCAC

U12 Branch Point Sequence:
CTCTCCTCACGT

Flanking Amino Acid:
QSFNNFMLRIGMNKGAVLAG

Intron Amino Acid Position:
1035

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
97.5
1.12
0.8
78.8
36.8

Major BPS
72.4
0.56
1
73.5
32.5

Major PPT
70
0.45
0.8
66
28.9

Minor 5ss
24.2
-3
3.6
33
41.9

Minor BPS
47.8
-0
2.1
67.41
49.1

Associated Gene:

Gene:
ADCY3

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

115661276 - 115673152
11877

115659796 - 115673152
13357