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Intron Name: Anas_platyrhynchos_platyrhynchos_3_115664275_115664360_R


Intron Information:

Intron Rank:
13

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
115664275 - 115664360

Intron Length:
86

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CGC|GTAAGGGGC

5'SS Class:
major

3'SS Sequence:
TGTCTCCCAGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTCCAC

U12 Branch Point Sequence:
CTACTCTTACAC

Flanking Amino Acid:
HYDRRRGQQSASALVPSKYS

Intron Amino Acid Position:
825

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
61.6
0.27
1.4
56.3
42.8

Major BPS
67.4
0.43
1.3
78.4
35.2

Major PPT
72.3
0.5
0.9
67.5
33.8

Minor 5ss
30.5
-2.2
3.5
36.2
41.4

Minor BPS
48.6
-0.1
1.7
57.42
41

Associated Gene:

Gene:
ADCY3

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

115661276 - 115673152
11877

115659796 - 115673152
13357