Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_115665815_115665962_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

115665815 - 115665962

Intron Length:

148

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGGCGC

5'SS Class:

major

3'SS Sequence:

CTTCGTGGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

TTTTTGTTGATT

Flanking Amino Acid:

TLESGEEDGEAVNPSFPNPR

Intron Amino Acid Position:

565

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

1.1

60.9

40.7

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

70.4

0.46

64.5

41.4

Minor 5ss

29.7

-2.3

3.5

41.4

45.3

Minor BPS

63.3

0.5

86.06

34.4

Associated Gene:

Gene:

ADCY3

Ensembl Gene ID:

ENSAPLG00000013028

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044877

115661276 - 115673152

11877

ENSAPLT00000013606

115659796 - 115673152

13357